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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "TemporalForest" in publications use:'
type: software
license: MIT
title: 'TemporalForest: Network-Guided Temporal Forests for Feature Selection in High-Dimensional
  Longitudinal Data'
version: 0.1.4
identifiers:
- type: doi
  value: 10.32614/CRAN.package.TemporalForest
abstract: Implements the Temporal Forest algorithm for feature selection in high-dimensional
  longitudinal data. The method combines time-aware network construction via weighted
  gene co-expression network analysis (WGCNA), module-based feature screening, and
  stability selection using tree-based models. This package provides tools for reproducible
  longitudinal analysis, closely following the methodology described in Shao, Moore,
  and Ramirez (2025) <https://github.com/SisiShao/TemporalForest>.
authors:
- family-names: Shao
  given-names: Sisi
  email: sisishao@g.ucla.edu
  orcid: https://orcid.org/0009-0000-9783-9205
- family-names: Moore
  given-names: Jason H.
  email: Jason.Moore@csmc.edu
  orcid: https://orcid.org/0000-0002-5015-1099
- family-names: Ramirez
  given-names: Christina M.
  email: cr@ucla.edu
  orcid: https://orcid.org/0000-0002-8435-0416
preferred-citation:
  type: manual
  title: 'TemporalForest: A package for reproducible feature selection in high-dimensional
    longitudinal data'
  authors:
  - family-names: Shao
    given-names: Sisi
    email: sisishao@g.ucla.edu
    orcid: https://orcid.org/0009-0000-9783-9205
  - family-names: Moore
    given-names: Jason H.
    email: Jason.Moore@csmc.edu
    orcid: https://orcid.org/0000-0002-5015-1099
  - family-names: Ramirez
    given-names: Christina M.
    email: cr@ucla.edu
    orcid: https://orcid.org/0000-0002-8435-0416
  year: '2025'
  notes: R package version 0.1.0
  url: https://github.com/SisiShao/TemporalForest
repository: https://sisishao.r-universe.dev
repository-code: https://github.com/SisiShao/TemporalForest
commit: 0841dc076847f9338c98ca315c66e0df1abaefdd
url: https://github.com/SisiShao/TemporalForest
date-released: '2025-12-22'
contact:
- family-names: Shao
  given-names: Sisi
  email: sisishao@g.ucla.edu
  orcid: https://orcid.org/0009-0000-9783-9205
references:
- type: unpublished
  title: Network-Guided TemporalForest for Feature Selection in High-Dimensional Longitudinal
    Data
  authors:
  - family-names: Shao
    given-names: Sisi
  - family-names: Moore
    given-names: Jason H.
  - family-names: Ramirez
    given-names: Christina M.
  year: '2025'
  notes: Manuscript submitted for publication.
  url: https://github.com/SisiShao/TemporalForest